chore(docker): improve base image and organize docker files

- Add wget, ripgrep, python3, and GitHub CLI (gh) to base image
- Add OPENCODE_ALLOW_ALL_MODELS=true to production ENV
- Move compose files, onboard-smoke Dockerfile to docker/
- Move entrypoint script to scripts/docker-entrypoint.sh
- Add Podman Quadlet unit files (pod, app, db containers)
- Add docker/README.md with build, compose, and quadlet docs
- Add scripts/docker-build-test.sh for local build validation
- Update all doc references for new file locations
- Keep main Dockerfile at project root (no .dockerignore changes needed)

Co-Authored-By: Paperclip <noreply@paperclip.ing>

Dockerfile

@@ -2,10 +2,17 @@ FROM node:lts-trixie-slim AS base
 ARG USER_UID=1000
 ARG USER_GID=1000
 RUN apt-get update \
-  && apt-get install -y --no-install-recommends ca-certificates curl git gosu \
+  && apt-get install -y --no-install-recommends ca-certificates gosu curl git wget ripgrep python3 \
-  && rm -rf /var/lib/apt/lists/*
+  && mkdir -p -m 755 /etc/apt/keyrings \
-
+  && wget -nv -O/etc/apt/keyrings/githubcli-archive-keyring.gpg https://cli.github.com/packages/githubcli-archive-keyring.gpg \
-RUN corepack enable
+  && echo "20e0125d6f6e077a9ad46f03371bc26d90b04939fb95170f5a1905099cc6bcc0  /etc/apt/keyrings/githubcli-archive-keyring.gpg" | sha256sum -c - \
+  && chmod go+r /etc/apt/keyrings/githubcli-archive-keyring.gpg \
+  && mkdir -p -m 755 /etc/apt/sources.list.d \
+  && echo "deb [arch=$(dpkg --print-architecture) signed-by=/etc/apt/keyrings/githubcli-archive-keyring.gpg] https://cli.github.com/packages stable main" > /etc/apt/sources.list.d/github-cli.list \
+  && apt-get update \
+  && apt-get install -y --no-install-recommends gh \
+  && rm -rf /var/lib/apt/lists/* \
+  && corepack enable
 
 # Modify the existing node user/group to have the specified UID/GID to match host user
 RUN usermod -u $USER_UID --non-unique node \
@@ -51,7 +58,7 @@ RUN npm install --global --omit=dev @anthropic-ai/claude-code@latest @openai/cod
   && mkdir -p /paperclip \
   && chown node:node /paperclip
 
-COPY docker-entrypoint.sh /usr/local/bin/
+COPY scripts/docker-entrypoint.sh /usr/local/bin/
 RUN chmod +x /usr/local/bin/docker-entrypoint.sh
 
 ENV NODE_ENV=production \
@@ -65,7 +72,8 @@ ENV NODE_ENV=production \
   USER_GID=${USER_GID} \
   PAPERCLIP_CONFIG=/paperclip/instances/default/config.json \
   PAPERCLIP_DEPLOYMENT_MODE=authenticated \
-  PAPERCLIP_DEPLOYMENT_EXPOSURE=private
+  PAPERCLIP_DEPLOYMENT_EXPOSURE=private \
+  OPENCODE_ALLOW_ALL_MODELS=true
 
 VOLUME ["/paperclip"]
 EXPOSE 3100

doc/DEVELOPING.md

@@ -97,7 +97,7 @@ docker run --name paperclip \
 Or use Compose:
 
 ```sh
-docker compose -f docker-compose.quickstart.yml up --build
+docker compose -f docker/docker-compose.quickstart.yml up --build
 ```
 
 See `doc/DOCKER.md` for API key wiring (`OPENAI_API_KEY` / `ANTHROPIC_API_KEY`) and persistence details.

doc/DOCKER.md

@@ -2,6 +2,28 @@
 
 Run Paperclip in Docker without installing Node or pnpm locally.
 
+All commands below assume you are in the **project root** (the directory containing `package.json`), not inside `docker/`.
+
+## Building the image
+
+```sh
+docker build -t paperclip-local .
+```
+
+The Dockerfile installs common agent tools (`git`, `gh`, `curl`, `wget`, `ripgrep`, `python3`) and the Claude, Codex, and OpenCode CLIs.
+
+Build arguments:
+
+| Arg | Default | Purpose |
+|-----|---------|---------|
+| `USER_UID` | `1000` | UID for the container `node` user (match your host UID to avoid permission issues on bind mounts) |
+| `USER_GID` | `1000` | GID for the container `node` group |
+
+```sh
+docker build -t paperclip-local \
+  --build-arg USER_UID=$(id -u) --build-arg USER_GID=$(id -g) .
+```
+
 ## One-liner (build + run)
 
 ```sh
@@ -10,6 +32,7 @@ docker run --name paperclip \
   -p 3100:3100 \
   -e HOST=0.0.0.0 \
   -e PAPERCLIP_HOME=/paperclip \
+  -e BETTER_AUTH_SECRET=$(openssl rand -hex 32) \
   -v "$(pwd)/data/docker-paperclip:/paperclip" \
   paperclip-local
 ```
@@ -25,10 +48,15 @@ Data persistence:
 
 All persisted under your bind mount (`./data/docker-paperclip` in the example above).
 
-## Compose Quickstart
+## Docker Compose
+
+### Quickstart (embedded SQLite)
+
+Single container, no external database. Data persists via a bind mount.
 
 ```sh
-docker compose -f docker-compose.quickstart.yml up --build
+BETTER_AUTH_SECRET=$(openssl rand -hex 32) \
+  docker compose -f docker/docker-compose.quickstart.yml up --build
 ```
 
 Defaults:
@@ -39,11 +67,36 @@ Defaults:
 Optional overrides:
 
 ```sh
-PAPERCLIP_PORT=3200 PAPERCLIP_DATA_DIR=./data/pc docker compose -f docker-compose.quickstart.yml up --build
+PAPERCLIP_PORT=3200 PAPERCLIP_DATA_DIR=../data/pc \
+  docker compose -f docker/docker-compose.quickstart.yml up --build
 ```
 
+**Note:** `PAPERCLIP_DATA_DIR` is resolved relative to the compose file (`docker/`), so `../data/pc` maps to `data/pc` in the project root.
+
 If you change host port or use a non-local domain, set `PAPERCLIP_PUBLIC_URL` to the external URL you will use in browser/auth flows.
 
+Pass `OPENAI_API_KEY` and/or `ANTHROPIC_API_KEY` to enable local adapter runs.
+
+### Full stack (with PostgreSQL)
+
+Paperclip server + PostgreSQL 17. The database is health-checked before the server starts.
+
+```sh
+BETTER_AUTH_SECRET=$(openssl rand -hex 32) \
+  docker compose -f docker/docker-compose.yml up --build
+```
+
+PostgreSQL data persists in a named Docker volume (`pgdata`). Paperclip data persists in `paperclip-data`.
+
+### Untrusted PR review
+
+Isolated container for reviewing untrusted pull requests with Codex or Claude, without exposing your host machine. See `doc/UNTRUSTED-PR-REVIEW.md` for the full workflow.
+
+```sh
+docker compose -f docker/docker-compose.untrusted-review.yml build
+docker compose -f docker/docker-compose.untrusted-review.yml run --rm --service-ports review
+```
+
 ## Authenticated Compose (Single Public URL)
 
 For authenticated deployments, set one canonical public URL and let Paperclip derive auth/callback defaults:
@@ -93,11 +146,71 @@ Notes:
 - Without API keys, the app still runs normally.
 - Adapter environment checks in Paperclip will surface missing auth/CLI prerequisites.
 
-## Untrusted PR Review Container
+## Podman Quadlet (systemd)
 
-If you want a separate Docker environment for reviewing untrusted pull requests with `codex` or `claude`, use the dedicated review workflow in `doc/UNTRUSTED-PR-REVIEW.md`.
+The `docker/quadlet/` directory contains unit files to run Paperclip + PostgreSQL as systemd services via Podman Quadlet.
 
-That setup keeps CLI auth state in Docker volumes instead of your host home directory and uses a separate scratch workspace for PR checkouts and preview runs.
+| File | Purpose |
+|------|---------|
+| `docker/quadlet/paperclip.pod` | Pod definition — groups containers into a shared network namespace |
+| `docker/quadlet/paperclip.container` | Paperclip server — joins the pod, connects to Postgres at `127.0.0.1` |
+| `docker/quadlet/paperclip-db.container` | PostgreSQL 17 — joins the pod, health-checked |
+
+### Setup
+
+1. Build the image (see above).
+
+2. Copy quadlet files to your systemd directory:
+
+   ```sh
+   # Rootless (recommended)
+   cp docker/quadlet/*.pod docker/quadlet/*.container \
+     ~/.config/containers/systemd/
+
+   # Or rootful
+   sudo cp docker/quadlet/*.pod docker/quadlet/*.container \
+     /etc/containers/systemd/
+   ```
+
+3. Create a secrets env file (keep out of version control):
+
+   ```sh
+   cat > ~/.config/containers/systemd/paperclip.env <<EOL
+   BETTER_AUTH_SECRET=$(openssl rand -hex 32)
+   POSTGRES_USER=paperclip
+   POSTGRES_PASSWORD=paperclip
+   POSTGRES_DB=paperclip
+   DATABASE_URL=postgres://paperclip:paperclip@127.0.0.1:5432/paperclip
+   # OPENAI_API_KEY=sk-...
+   # ANTHROPIC_API_KEY=sk-...
+   EOL
+   ```
+
+4. Create the data directory and start:
+
+   ```sh
+   mkdir -p ~/.local/share/paperclip
+   systemctl --user daemon-reload
+   systemctl --user start paperclip-pod
+   ```
+
+### Quadlet management
+
+```sh
+journalctl --user -u paperclip -f        # App logs
+journalctl --user -u paperclip-db -f     # DB logs
+systemctl --user status paperclip-pod    # Pod status
+systemctl --user restart paperclip-pod   # Restart all
+systemctl --user stop paperclip-pod      # Stop all
+```
+
+### Quadlet notes
+
+- **First boot**: Unlike Docker Compose's `condition: service_healthy`, Quadlet's `After=` only waits for the DB unit to *start*, not for PostgreSQL to be ready. On a cold first boot you may see one or two restart attempts in `journalctl --user -u paperclip` while PostgreSQL initialises — this is expected and resolves automatically via `Restart=on-failure`.
+- Containers in a pod share `localhost`, so Paperclip reaches Postgres at `127.0.0.1:5432`.
+- PostgreSQL data persists in the `paperclip-pgdata` named volume.
+- Paperclip data persists at `~/.local/share/paperclip`.
+- For rootful quadlet deployment, remove `%h` prefixes and use absolute paths.
 
 ## Onboard Smoke Test (Ubuntu + npm only)
 
@@ -133,4 +246,9 @@ Notes:
 - In authenticated mode, the smoke script defaults `SMOKE_AUTO_BOOTSTRAP=true` and drives the real bootstrap path automatically: it signs up a real user, runs `paperclipai auth bootstrap-ceo` inside the container to mint a real bootstrap invite, accepts that invite over HTTP, and verifies board session access.
 - Run the script in the foreground to watch the onboarding flow; stop with `Ctrl+C` after validation.
 - Set `SMOKE_DETACH=true` to leave the container running for automation and optionally write shell-ready metadata to `SMOKE_METADATA_FILE`.
-- The image definition is in `Dockerfile.onboard-smoke`.
+- The image definition is in `docker/Dockerfile.onboard-smoke`.
+
+## General Notes
+
+- The `docker-entrypoint.sh` adjusts the container `node` user UID/GID at startup to match the values passed via `USER_UID`/`USER_GID`, avoiding permission issues on bind-mounted volumes.
+- Paperclip data persists via Docker volumes/bind mounts (compose) or at `~/.local/share/paperclip` (quadlet).

doc/UNTRUSTED-PR-REVIEW.md

@@ -16,14 +16,14 @@ By default this workflow does **not** mount your host repo checkout, your host h
 ## Files
 
 - `docker/untrusted-review/Dockerfile`
-- `docker-compose.untrusted-review.yml`
+- `docker/docker-compose.untrusted-review.yml`
 - `review-checkout-pr` inside the container
 
 ## Build and start a shell
 
 ```sh
-docker compose -f docker-compose.untrusted-review.yml build
+docker compose -f docker/docker-compose.untrusted-review.yml build
-docker compose -f docker-compose.untrusted-review.yml run --rm --service-ports review
+docker compose -f docker/docker-compose.untrusted-review.yml run --rm --service-ports review
 ```
 
 That opens an interactive shell in the review container with:
@@ -47,7 +47,7 @@ claude login
 If you prefer API-key auth instead of CLI login, pass keys through Compose env:
 
 ```sh
-OPENAI_API_KEY=... ANTHROPIC_API_KEY=... docker compose -f docker-compose.untrusted-review.yml run --rm review
+OPENAI_API_KEY=... ANTHROPIC_API_KEY=... docker compose -f docker/docker-compose.untrusted-review.yml run --rm review
 ```
 
 ## Check out a PR safely
@@ -117,7 +117,7 @@ Notes:
 Remove the review container volumes when you want a clean environment:
 
 ```sh
-docker compose -f docker-compose.untrusted-review.yml down -v
+docker compose -f docker/docker-compose.untrusted-review.yml down -v
 ```
 
 That deletes:

docker/docker-compose.quickstart.yml

@@ -1,7 +1,7 @@
 services:
   paperclip:
     build:
-      context: .
+      context: ..
       dockerfile: Dockerfile
     ports:
       - "${PAPERCLIP_PORT:-3100}:3100"
@@ -15,4 +15,4 @@ services:
       PAPERCLIP_PUBLIC_URL: "${PAPERCLIP_PUBLIC_URL:-http://localhost:3100}"
       BETTER_AUTH_SECRET: "${BETTER_AUTH_SECRET:?BETTER_AUTH_SECRET must be set}"
     volumes:
-      - "${PAPERCLIP_DATA_DIR:-./data/docker-paperclip}:/paperclip"
+      - "${PAPERCLIP_DATA_DIR:-../data/docker-paperclip}:/paperclip"

docker/docker-compose.untrusted-review.yml

@@ -1,7 +1,7 @@
 services:
   review:
     build:
-      context: .
+      context: ..
       dockerfile: docker/untrusted-review/Dockerfile
     init: true
     tty: true

docker/docker-compose.yml

@@ -16,7 +16,9 @@ services:
       - pgdata:/var/lib/postgresql/data
 
   server:
-    build: .
+    build:
+      context: ..
+      dockerfile: Dockerfile
     ports:
       - "3100:3100"
     environment:

docker/quadlet/paperclip-db.container

@@ -0,0 +1,20 @@
+[Unit]
+Description=PostgreSQL for Paperclip
+
+[Container]
+Image=docker.io/library/postgres:17-alpine
+ContainerName=paperclip-db
+Pod=paperclip.pod
+Volume=paperclip-pgdata:/var/lib/postgresql/data
+EnvironmentFile=%h/.config/containers/systemd/paperclip.env
+HealthCmd=pg_isready -U $POSTGRES_USER -d $POSTGRES_DB -h localhost || exit 1
+HealthInterval=15s
+HealthTimeout=5s
+HealthRetries=5
+
+[Service]
+Restart=on-failure
+TimeoutStartSec=60
+
+[Install]
+WantedBy=default.target

docker/quadlet/paperclip.container

@@ -0,0 +1,23 @@
+[Unit]
+Description=Paperclip AI Agent Orchestrator
+Requires=paperclip-db.service
+After=paperclip-db.service
+
+[Container]
+Image=paperclip-local
+ContainerName=paperclip
+Pod=paperclip.pod
+Volume=%h/.local/share/paperclip:/paperclip:Z
+Environment=HOST=0.0.0.0
+Environment=PAPERCLIP_HOME=/paperclip
+Environment=PAPERCLIP_DEPLOYMENT_MODE=authenticated
+Environment=PAPERCLIP_DEPLOYMENT_EXPOSURE=private
+Environment=PAPERCLIP_PUBLIC_URL=http://localhost:3100
+EnvironmentFile=%h/.config/containers/systemd/paperclip.env
+
+[Service]
+Restart=on-failure
+TimeoutStartSec=120
+
+[Install]
+WantedBy=default.target

docker/quadlet/paperclip.pod

@@ -0,0 +1,3 @@
+[Pod]
+PodName=paperclip
+PublishPort=3100:3100

docs/deploy/docker.md

@@ -8,7 +8,7 @@ Run Paperclip in Docker without installing Node or pnpm locally.
 ## Compose Quickstart (Recommended)
 
 ```sh
-docker compose -f docker-compose.quickstart.yml up --build
+docker compose -f docker/docker-compose.quickstart.yml up --build
 ```
 
 Open [http://localhost:3100](http://localhost:3100).
@@ -21,10 +21,12 @@ Defaults:
 Override with environment variables:
 
 ```sh
-PAPERCLIP_PORT=3200 PAPERCLIP_DATA_DIR=./data/pc \
+PAPERCLIP_PORT=3200 PAPERCLIP_DATA_DIR=../data/pc \
-  docker compose -f docker-compose.quickstart.yml up --build
+  docker compose -f docker/docker-compose.quickstart.yml up --build
 ```
 
+**Note:** `PAPERCLIP_DATA_DIR` is resolved relative to the compose file (`docker/`), so `../data/pc` maps to `data/pc` in the project root.
+
 ## Manual Docker Build
 
 ```sh

scripts/docker-build-test.sh

@@ -0,0 +1,46 @@
+#!/usr/bin/env bash
+# Verify the Docker image builds successfully.
+# Skips gracefully when docker/podman is not available.
+set -euo pipefail
+
+REPO_ROOT="$(cd "$(dirname "$0")/.." && pwd)"
+
+# Detect container runtime
+if command -v docker >/dev/null 2>&1; then
+  RUNTIME=docker
+elif command -v podman >/dev/null 2>&1; then
+  RUNTIME=podman
+else
+  echo "SKIP: neither docker nor podman found — skipping build test"
+  exit 0
+fi
+
+# Verify the daemon is reachable (docker may be installed but not running)
+if ! "$RUNTIME" info >/dev/null 2>&1; then
+  echo "SKIP: $RUNTIME is installed but not running — skipping build test"
+  exit 0
+fi
+
+IMAGE_TAG="paperclip-build-test:$$"
+trap '"$RUNTIME" rmi "$IMAGE_TAG" >/dev/null 2>&1 || true' EXIT
+
+echo "==> Testing Docker build with $RUNTIME"
+"$RUNTIME" build \
+  -f "$REPO_ROOT/Dockerfile" \
+  -t "$IMAGE_TAG" \
+  --target production \
+  "$REPO_ROOT"
+
+echo "==> Verifying key binaries in image"
+"$RUNTIME" run --rm "$IMAGE_TAG" sh -c '
+  set -e
+  node --version
+  git --version
+  gh --version
+  rg --version
+  python3 --version
+  curl --version | head -1
+  claude --version 2>/dev/null || echo "claude CLI not found (OK in minimal builds)"
+'
+
+echo "PASS: Docker build test succeeded"

scripts/docker-onboard-smoke.sh

@@ -242,7 +242,7 @@ echo "==> Building onboard smoke image"
 docker build \
   --build-arg PAPERCLIPAI_VERSION="$PAPERCLIPAI_VERSION" \
   --build-arg HOST_UID="$HOST_UID" \
-  -f "$REPO_ROOT/Dockerfile.onboard-smoke" \
+  -f "$REPO_ROOT/docker/Dockerfile.onboard-smoke" \
   -t "$IMAGE_NAME" \
   "$REPO_ROOT"