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## Thinking Path > - Paperclip orchestrates AI agents for zero-human companies > - The company import/export e2e exercises the local CLI startup path that boots the dev server inside a workspace > - That startup path loads server and plugin code which depends on built workspace package artifacts such as `@paperclipai/shared` and `@paperclipai/plugin-sdk` > - In a clean worktree those `dist/*` artifacts may not exist yet even though `paperclipai run` can still attempt to import the local server entry > - That mismatch caused the import/export e2e to fail before the actual company package flow ran > - This pull request adds a CLI preflight step that prepares the needed workspace build dependencies before the local server import and fails closed if that preflight is interrupted or stalls > - The benefit is that clean worktrees can boot `paperclipai run` reliably without silently continuing after incomplete dependency preparation ## What Changed - Updated `cli/src/commands/run.ts` to execute `scripts/ensure-plugin-build-deps.mjs` before importing `server/src/index.ts` for local dev startup. - Ensured `paperclipai run` can materialize missing workspace artifacts such as `packages/shared/dist` and `packages/plugins/sdk/dist` automatically in clean worktrees. - Made the preflight fail closed when the child process exits via signal and bounded it with a 120-second timeout so the CLI does not hang indefinitely. - Kept the fix isolated to the CLI startup path; no API contract, schema, or UI behavior changed. - Reused the existing `cli/src/__tests__/company-import-export-e2e.test.ts` coverage that already exercises the failing boot path, so no additional test file was needed. ## Verification - `pnpm test:run cli/src/__tests__/company-import-export-e2e.test.ts` - `pnpm --filter paperclipai typecheck` - On the isolated branch, confirmed `packages/shared/dist/index.js` and `packages/plugins/sdk/dist/index.js` were absent before the run, then reran the targeted e2e and observed a passing result. ## Risks - Low risk: the change only affects the local CLI dev startup path before the server import. - Residual risk: other entrypoints still rely on their own preflight/build behavior, so this does not normalize every workspace startup path. - The 120-second timeout is intentionally generous, but unusually slow machines could still hit it and surface a startup error instead of waiting forever. ## Model Used - OpenAI Codex, GPT-5-based coding agent in the Codex CLI environment, with shell/tool execution enabled. The exact runtime revision and context window are not exposed by this environment. ## Checklist - [x] I have included a thinking path that traces from project context to this change - [x] I have specified the model used (with version and capability details) - [x] I have run tests locally and they pass - [x] I have added or updated tests where applicable - [x] If this change affects the UI, I have included before/after screenshots - [x] I have updated relevant documentation to reflect my changes - [x] I have considered and documented any risks above - [x] I will address all Greptile and reviewer comments before requesting merge